CDS

Accession Number TCMCG007C52453
gbkey CDS
Protein Id XP_009112127.1
Location join(4692332..4692390,4692504..4692786,4692879..4693100,4693928..4694250,4694481..4694610,4694681..4695220)
Gene LOC103837523
GeneID 103837523
Organism Brassica rapa

Protein

Length 518aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009113879.3
Definition bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category H
Description GTP cyclohydrolase II
KEGG_TC -
KEGG_Module M00125        [VIEW IN KEGG]
M00840        [VIEW IN KEGG]
KEGG_Reaction R00425        [VIEW IN KEGG]
R07281        [VIEW IN KEGG]
KEGG_rclass RC00293        [VIEW IN KEGG]
RC01792        [VIEW IN KEGG]
RC01815        [VIEW IN KEGG]
RC02504        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K14652        [VIEW IN KEGG]
EC 3.5.4.25        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.1.99.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00740        [VIEW IN KEGG]
ko00790        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00740        [VIEW IN KEGG]
map00790        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003933        [VIEW IN EMBL-EBI]
GO:0003935        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006766        [VIEW IN EMBL-EBI]
GO:0006767        [VIEW IN EMBL-EBI]
GO:0006771        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008686        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009110        [VIEW IN EMBL-EBI]
GO:0009231        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016810        [VIEW IN EMBL-EBI]
GO:0016814        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016830        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019238        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042364        [VIEW IN EMBL-EBI]
GO:0042726        [VIEW IN EMBL-EBI]
GO:0042727        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCGATCAATCTAACGTCTTCCTCTCCTTCCACCATATCTCTCTCCCGCTCAAGACTTAGCCAAACCTCTACTACTACTACATTGCTCCACCGTATCACTCTCCCATCATCATCCTTCTCAATTAAAGCCACTTCAAAAGTCAAAGCTTCAGTGATCTCTAGAGAAGATGATCTCCTCTCTTCTTACAACACCAATGGTTCTCTCGTTGACCAAGACTCCTCATCCCCTGCACCACCCAATGGCTTCGTAGCTGAAGACGATGACTACGAGCTGGATCTACCCACACCTGGCTTCTCTTCAATCCCTGAAGCCATCGAAGACATACGCCAAGGAAAGCTTGTGGTGGTTGTTGATGATGAAGACAGAGAAAACGAAGGAGACTTGGTAATGGCTGCTCAGTTAGCTACACCTGAGGCTATGGCTTTTATTGTCAAACATGGAACTGGGATTGTTTGTGTGAGTATGAAAGATGATGATCTCCAGAGGTTGAACCTTCCTCTGATGGTGAATCAGAAGGAGAACGAAGAGAAACTCTGCACTGCATTCACAGTCACTGTGGATGCAAAACATGGTACAACAACAGGAGTATCAGCACGTGACAGGGCAACAACGATACTGTCACTTGCATCTAGAGACTCAAAGCCTGAAGATTTCATCCGTCCAGGGCATATCTTTCCTCTCAAGTACCGAGAAGGCGGAGTTTTAAGAAGAGCTGGACACACTGAAGCATCTCTTGATCTTACTGTCTTAGCTGGACTAGAACCTGTTGGAGTACTCTGTGAGATTGTTGATGATGATGGTTCCATGGCTAGATTACCAAAGCTCCGCGAGTTCGCAGCTGAGAACAACCTCAAAATTGTTTCCATTGCAGATTTGATCAGATATCGAAGGAAGAGAGATAAGCTAGTGGAACGTTCTTCTGCAGCTCGGATTCCGACAATGTGGGGACCTTTCACAGCTTATTGCTACAAGTCTATACTAGACGGCATAGAGCACATTGCAATGGTTAAGGGAGAGATTGGTGACGGTCAAGACATTCTAGTGAGGGTTCATTCAGAATGTCTCACTGGAGACATATTTGGATCAGCAAGGTGTGACTGCGGGAACCAGCTAGCTCTTGCGATGCAGCAGATTGAGTCTGCTGGTCGTGGTGTGTTGGTTTACTTGCGTGGACATGAAGGAAGAGGGATTGGTTTAGGACACAAGCTTAGAGCTTATAATCTGCAAGATGCTGGGAGGGATACAGTTGAAGCTAACGAGGAGCTAGGACTTCCTGTTGATTCTAGAGAGTATGGTATTGGTGCACAGGTACTGAGGGATTTGGGAGTGAGGACGATGAAGCTGATGACGAATAATCCGGCTAAGTATGTTGGTTTGAAGGGATATGGATTAGCTATTGTGGGGAGAGTGCCTCTCTTGAGTCTTATCACAAAGGAGAATAAGAGATATTTGGAGACGAAGAGGGCCAAGATGGGTCACATGTATGGTTTGAAGTTCAGTGGTGATGATGTTGTAGAGAAGATTGATGATTCTGCAACCACCGAGTCATGA
Protein:  
MSSINLTSSSPSTISLSRSRLSQTSTTTTLLHRITLPSSSFSIKATSKVKASVISREDDLLSSYNTNGSLVDQDSSSPAPPNGFVAEDDDYELDLPTPGFSSIPEAIEDIRQGKLVVVVDDEDRENEGDLVMAAQLATPEAMAFIVKHGTGIVCVSMKDDDLQRLNLPLMVNQKENEEKLCTAFTVTVDAKHGTTTGVSARDRATTILSLASRDSKPEDFIRPGHIFPLKYREGGVLRRAGHTEASLDLTVLAGLEPVGVLCEIVDDDGSMARLPKLREFAAENNLKIVSIADLIRYRRKRDKLVERSSAARIPTMWGPFTAYCYKSILDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMQQIESAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDAGRDTVEANEELGLPVDSREYGIGAQVLRDLGVRTMKLMTNNPAKYVGLKGYGLAIVGRVPLLSLITKENKRYLETKRAKMGHMYGLKFSGDDVVEKIDDSATTES